Introduction: Pseudo-TORCH syndrome, named as such due to the mimicry of intrauterine TORCH infections in the absence of infection, is a neurological disorder presenting primarily with congenital microcephaly, intracranial calcifications, simplified gyration and polymicrogyria, and severe developmental delay, which can be attributed to variants in the OCLN gene. MCC2 deficiency, a neurometabolic disorder due to impairments in the catabolism of Leucine, with highly variable clinical presentations in addition to landmark metabolic features is put down to variants in MCCC2 gene. Case Presentation: Known as independent conditions, the intriguing presence of dual manifestations in a 3.5-year-old boy was investigated in the study. The patient was referred to our Myelin Disorders Clinic due to congenital microcephaly, developmental regression, and medication-resistant epilepsy. WES was performed on patient’s samples for variant detection and subsequent confirmation. Bioinformatics analysis was performed for prioritization and validation according to the standard criteria. The resultant findings were consequently confirmed in the proband and his parents by Sanger sequencing. WES revealed the presence of two concurrent variants in OCLN and MCCC2 on the same chromosome, chromosome 5, both in homozygous state in the proband. Both variants are classified as pathogenic according to ACMG classification system having been previously reported in the literature. Conclusion: The two variants observed in our patient, a homozygous missense change and a homozygous deletion interestingly occurring on the same chromosome, lead us to think that either these two conditions may be totally independent of each other, having co-occurred by chance, or there may be an underlying association between the two variants, rendering their co-occurrence as a haplotype more possible.

1.
Baraitser
M
,
Brett
EM
,
Piesowicz
AT
.
Microcephaly and intracranial calcification in two brothers
.
J Med Genet
.
1983
;
20
(
3
):
210
2
.
2.
Baumgartner
MR
,
Almashanu
S
,
Suormala
T
,
Obie
C
,
Cole
RN
,
Packman
S
, et al
.
The molecular basis of human 3-methylcrotonyl-CoA carboxylase deficiency
.
J Clin Invest
.
2001
;
107
(
4
):
495
504
.
3.
Richards
S
,
Aziz
N
,
Bale
S
,
Bick
D
,
Das
S
,
Gastier-Foster
J
, et al
.
Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American college of medical genetics and genomics and the association for molecular pathology
.
Genet Med
.
2015
;
17
(
5
):
405
24
.
4.
Aggarwal
S
,
Bahal
A
,
Dalal
A
.
Renal dysfunction in sibs with band like calcification with simplified gyration and polymicrogyria: report of a new mutation and review of literature
.
Eur J Med Genet
.
2016
;
59
(
1
):
5
10
.
5.
Borges-Medeiros
R
,
Mendes de Oliveira
JR
.
A commentary on band-like calcification with simplified gyration and polymicrogyria: report of 10 new families and identification of five novel OCLN mutations
.
J Hum Genet
.
2018
;
63
(
2
):
255
6
.
6.
Şahin
S
,
Yıldırım
M
,
Bektaş
Ö
,
Sürücü Kara
İ
,
Ceylan
AC
,
Teber
S
.
Intracranial calcification associated with 3-methylcrotonyl-CoA carboxylase deficiency
.
Mol Syndromol
.
2021
;
12
(
6
):
393
8
.
7.
Shepard
PJ
,
Barshop
BA
,
Baumgartner
MR
,
Hansen
JB
,
Jepsen
K
,
Smith
EN
, et al
.
Consanguinity and rare mutations outside of MCCC genes underlie nonspecific phenotypes of MCCD
.
Genet Med
.
2015
;
17
(
8
):
660
7
.
8.
Wolfe
LA
,
Finegold
DN
,
Vockley
J
,
Walters
N
,
Chambaz
C
,
Suormala
T
, et al
.
Potential misdiagnosis of 3-MethylcrotonylCoenzyme A carboxylase deficiency associated with absent or trace urinary 3-methylcrotonylglycine
.
Pediatrics
.
2007
;
120
(
5
):
e1335
40
.
9.
Morscher
RJ
,
Grünert
SC
,
Bürer
C
,
Burda
P
,
Suormala
T
,
Fowler
B
, et al
.
A single mutation in MCCC1 or MCCC2 as a potential cause of positive screening for 3-methylcrotonyl-CoA carboxylase deficiency
.
Mol Genet Metab
.
2012
;
105
(
4
):
602
6
.
10.
Alsemari
A
,
Alsuhaibani
M
,
Alhathlool
R
,
Ali
BM
.
Potential oligogenic disease of mental retardation, short stature, spastic paraparesis, and osteopetrosis
.
Appl Clin Genet
.
2018
;
11
:
129
34
.
11.
Grünert
SC
,
Stucki
M
,
Morscher
RJ
,
Suormala
T
,
Bürer
C
,
Burda
P
, et al
.
3-methylcrotonyl-CoA carboxylase deficiency: clinical, biochemical, enzymatic and molecular studies in 88 individuals
.
Orphanet J Rare Dis
.
2012
;
7
:
31
.
12.
Fonseca
H
,
Azevedo
L
,
Serrano
C
,
Sousa
C
,
Marcão
A
,
Vilarinho
L
.
3-Methylcrotonyl-CoA carboxylase deficiency: mutational spectrum derived from comprehensive newborn screening
.
Gene
.
2016
;
594
(
2
):
203
10
.
13.
Al-Shamsi
A
,
Hertecant
JL
,
Souid
A-K
,
Al-Jasmi
FA
.
Whole exome sequencing diagnosis of inborn errors of metabolism and other disorders in United Arab Emirates
.
Orphanet J Rare Dis
.
2016
;
11
(
1
):
94
.
14.
Baykal
T
,
Huner Gokcay
G
,
Ince
Z
, et al
.
Consanguineous 3-methylcrotonyl-CoA carboxylase deficiency: early-onset necrotizing encephalopathy with lethal outcome
.
J Inherit Metab Dis
.
2005
;
28
(
2
):
229
33
.
15.
Yang
L
,
Yang
J
,
Zhang
T
,
Weng
C
,
Hong
F
,
Tong
F
, et al
.
Identification of eight novel mutations and transcript analysis of two splicing mutations in Chinese newborns with MCC deficiency
.
Clin Genet
.
2015
;
88
(
5
):
484
8
.
16.
Briggs
TA
,
Wolf
NI
,
D’Arrigo
S
,
Ebinger
F
,
Harting
I
,
Dobyns
WB
, et al
.
Band-like intracranial calcification with simplified gyration and polymicrogyria: a distinct ‘‘Pseudo-TORCH’’ phenotype
.
Am J Med Genet
.
2008
;
146A
(
24
):
3173
80
.
17.
O’Driscoll
MC
,
Daly
SB
,
Urquhart
JE
,
Black
GCM
,
Pilz
DT
,
Brockmann
K
, et al
.
Recessive mutations in the gene encoding the tight junction protein Occludin cause band-like calcification with simplified gyration and polymicrogyria
.
Am J Hum Genet
.
2010
;
87
(
3
):
354
64
.
18.
Ekinci
F
,
Dincer Yildizdas
R
,
Ozgur Horoza
O
,
Hergunerb
O
,
Bisgin
A
.
A homozygote frameshift mutation in OCLN gene result in Pseudo-TORCH syndrome type I: a case report extending the phenotype with central diabetes insipidus and renal dysfunction
.
Eur J Med Genet
.
2020
;
63
(
6
):
103923
.
19.
Elsaid
MF
,
Hussein
K
,
Chalhoub
N
,
Aziz
NA
,
Ibrahim
K
,
Ben-Omran
T
, et al
.
Whole genome sequencing identifies a novel occludin mutation in microcephaly with band-like calcification and polymicrogyria that extends the phenotypic spectrum
.
Am J Med Genet
.
2014
;
164A
(
6
):
1614
7
.
20.
Ng
VKS
,
Lau
TK
,
Kan
ASY
,
Chung
BHY
,
Luk
HM
,
Ng
WF
, et al
.
A fetus with congenital microcephaly, microphthalmia and cataract was detected with biallelic variants in the OCLN gene: a case report
.
Diagnostics
.
2021
;
11
(
9
):
1576
.
21.
Raza Alvi
J
,
Gul Ahdi
S
,
Sultan
M
,
Sultan
T
.
Pseudo -torch- A rare mutation causing global development delay, microcephaly and extensive band-like brain calcification
.
Pakistan Journal of Neurological sciences
.
22.
Akter
N
,
Shamsad
I
.
Homozygous mutation of OCLN gene result in pseudo-TORCH syndrome type I: a case report and literature review
.
Clin Case Rep Int
.
2022
;
6
(
1
):
1298
.
23.
Posey
JE
,
Harel
T
,
Liu
P
,
Rosenfeld
JA
,
James
RA
,
Coban Akdemir
ZH
, et al
.
Resolution of disease phenotypes resulting from multilocus genomic variation
.
N Engl J Med
.
2017
;
376
(
1
):
21
31
.
You do not currently have access to this content.