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1-20 of 23
Keywords: Epistasis
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Journal Articles
GLIDE: GPU-Based Linear Regression for Detection of Epistasis
Available to PurchaseSubject Area:
Genetics
Tony Kam-Thong, Chloé-Agathe Azencott, Lawrence Cayton, Benno Pütz, André Altmann, Nazanin Karbalai, Philipp G. Sämann, Bernhard Schölkopf, Bertram Müller-Myhsok, Karsten M. Borgwardt
Journal:
Human Heredity
Hum Hered (2012) 73 (4): 220–236.
Published Online: 04 September 2012
... hippocampal volume data in 6 h per data set, while current single CPU-based approaches require more than a year’s time to complete the same task. Epistasis Genome-wide interaction analysis Computational biology Graphics processing units Original Paper Hum Hered 2012;73:220 236 DOI: 10.1159/000341885...
Journal Articles
KELVIN: A Software Package for Rigorous Measurement of Statistical Evidence in Human Genetics
Open AccessSubject Area:
Genetics
Veronica J. Vieland, Yungui Huang, Sang-Cheol Seok, John Burian, Umit Catalyurek, Jeffrey O’Connell, Alberto Segre, William Valentine-Cooper
Journal:
Human Heredity
Hum Hered (2011) 72 (4): 276–288.
Published Online: 23 December 2011
... of heterogeneity, and KELVIN itself utilizes sophisticated software engineering to provide a powerful and robust platform for studying the genetics of complex disorders. 23 12 2011 Association Covariates Epistasis Imprinting Linkage Linkage disequilibrium Quantitative traits Software KELVIN...
Journal Articles
Detecting Pleiotropy and Epistasis Using Variance Components Linkage Analysis in jPAP
Available to PurchaseSubject Area:
Genetics
Journal:
Human Heredity
Hum Hered (2011) 72 (4): 258–263.
Published Online: 23 December 2011
... between the traits. The inclusion of multiple quantitative trait loci in linkage analysis allows the inference of epistasis between loci. A user-friendly graphical user interface facilitates the usage of jPAP. 23 12 2011 © 2011 S. Karger AG, Basel 2011 Copyright / Drug Dosage / Disclaimer...
Journal Articles
Adaptive Tests for Detecting Gene-Gene and Gene-Environment Interactions
Available to PurchaseSubject Area:
Genetics
Journal:
Human Heredity
Hum Hered (2011) 72 (2): 98–109.
Published Online: 16 September 2011
..., Minneapolis, Minn., USA Key Words Complex traits Epistasis Logistic regression Adaptive Neyman test Simulation SSU test Sum test UminP test Abstract There has been an increasing interest in detecting genegene and gene-environment interactions in genetic association studies. A major statistical...
Journal Articles
Causal Models for Investigating Complex Disease: I. A Primer
Available to PurchaseSubject Area:
Genetics
Journal:
Human Heredity
Hum Hered (2011) 72 (1): 54–62.
Published Online: 09 September 2011
... of observed data. Conclusion: Causal models can enhance research aimed at identifying causal genes. Additive models Causal models Multiplicative models Epidemiology Genetics Heterogeneity models Epistasis Penetrance National Institutes of Health (NIH) 10.13039/100000002 Original...
Journal Articles
Causal Models for Investigating Complex Genetic Disease: II. What Causal Models Can Tell Us about Penetrance for Additive, Heterogeneity, and Multiplicative Two-Locus Models
Available to PurchaseSubject Area:
Genetics
Journal:
Human Heredity
Hum Hered (2011) 72 (1): 63–72.
Published Online: 09 September 2011
... to in the content or advertisements. Causal models Epidemiology Genetics Two-locus models Penetrance Additive models Heterogeneity models Multiplicative models Epistasis National Institutes of Health (NIH) 10.13039/100000002 Original Paper Hum Hered 2011;72:63 72 DOI: 10.1159/000330780...
Journal Articles
The Meaning of Interaction
Available to PurchaseSubject Area:
Genetics
Journal:
Human Heredity
Hum Hered (2011) 70 (4): 269–277.
Published Online: 08 December 2010
... or property resulting from any ideas, methods, instructions or products referred to in the content or advertisements. Epistasis Gametic phase disequilibrium Interaction Transformation National Institutes of Health (NIH) 10.13039/100000002 Original Paper Hum Hered 2010;70:269 277 DOI...
Journal Articles
A Simple and Computationally Efficient Sampling Approach to Covariate Adjustment for Multifactor Dimensionality Reduction Analysis of Epistasis
Available to PurchaseSubject Area:
Genetics
Jiang Gui, Angeline S. Andrew, Peter Andrews, Heather M. Nelson, Karl T. Kelsey, Margaret R. Karagas, Jason H. Moore
Journal:
Human Heredity
Hum Hered (2010) 70 (3): 219–225.
Published Online: 01 October 2010
...Jiang Gui; Angeline S. Andrew; Peter Andrews; Heather M. Nelson; Karl T. Kelsey; Margaret R. Karagas; Jason H. Moore Epistasis or gene-gene interaction is a fundamental component of the genetic architecture of complex traits such as disease susceptibility. Multifactor dimensionality reduction (MDR...
Journal Articles
Statistical Tests of Genetic Association in the Presence of Gene-Gene and Gene-Environment Interactions
Available to PurchaseSubject Area:
Genetics
Journal:
Human Heredity
Hum Hered (2010) 69 (2): 131–142.
Published Online: 04 December 2009
.... Epistasis Genome-wide association study Logistic regression Main-effects model Score test SNP Sum of squared score tests National Institutes of Health (NIH) 10.13039/100000002 Original Paper Hum Hered 2010;69:131 142 DOI: 10.1159/000264450 Received: May 12, 2009 Accepted after revision...
Journal Articles
Allelic Based Gene-Gene Interaction in Case-Control Studies
Available to PurchaseSubject Area:
Genetics
Journal:
Human Heredity
Hum Hered (2009) 69 (1): 14–27.
Published Online: 02 October 2009
... by the Cochran-Armitage method and (2) the allelic based method provides higher power than two genotypic based methods. Allelic test Interaction effect Score test Cochran-Armitage method Epistasis Original Paper Hum Hered 2010;69:14 27 DOI: 10.1159/000243150 Received: November 24, 2008 Accepted after...
Journal Articles
A New Strategy for Linkage Analysis under Epistasis Taking into Account Genetic Heterogeneity
Available to PurchaseSubject Area:
Genetics
Alexandre Bureau, Chantal Mérette, Jordie Croteau, Alain Fournier, Yvon C. Chagnon, Marc-André Roy, Michel Maziade
Journal:
Human Heredity
Hum Hered (2009) 68 (4): 231–242.
Published Online: 22 July 2009
...Alexandre Bureau; Chantal Mérette; Jordie Croteau; Alain Fournier; Yvon C. Chagnon; Marc-André Roy; Michel Maziade Background/Aims: Epistasis, the biological interaction of multiple genes modulating their individual effects, is likely omnipresent in complex diseases, and modelling epistasis...
Journal Articles
Exploring the Performance of Multifactor Dimensionality Reduction in Large Scale SNP Studies and in the Presence of Genetic Heterogeneity among Epistatic Disease Models
Available to PurchaseSubject Area:
Genetics
Journal:
Human Heredity
Hum Hered (2009) 67 (3): 183–192.
Published Online: 15 December 2008
... Epistasis MDR Heterogeneity Original Paper Hum Hered 2009;67:183 192 DOI: 10.1159/000181157 Received: May 2, 2008 Accepted after revision: July 1, 2008 Published online: December 15, 2008 Exploring the Performance of Multifactor Dimensionality Reduction in Large Scale SNP Studies and in the Presence...
Journal Articles
Adequacy of Single-Locus Approximations for Linkage Analyses of Oligogenic Traits: Extension to Multigenerational Pedigree Structures
Available to PurchaseSubject Area:
Genetics
Journal:
Human Heredity
Hum Hered (1993) 43 (6): 329–336.
Published Online: 02 September 2008
... Institute, and Mt. Sinai Medical Center, New York, N.Y., USA Adequacy of Single-Locus Approximations for Linkage Analyses of Oligogenic Traits: Extension to Multigenerational Pedigree Structures Key Words Linkage analysis Two-locus models Epistasis Reduced penetrance Simulation Extended pedigrees Abstract...
Journal Articles
Modeling Gene-Gene Interactions Using Graphical Chain Models
Available to PurchaseSubject Area:
Genetics
Journal:
Human Heredity
Hum Hered (2007) 65 (1): 47–56.
Published Online: 25 July 2007
... multiplicative, and six were epistasis models. For each situation, the choice for a statistical model was based on global model fit as judged by two different information criteria, the BIC and the AIC. Results: Both methods failed in most of the scenarios to capture the gene-gene interaction present...
Journal Articles
Detection of Gene × Gene Interactions in Genome-Wide Association Studies of Human Population Data
Available to PurchaseSubject Area:
Genetics
Solomon K. Musani, Daniel Shriner, Nianjun Liu, Rui Feng, Christopher S. Coffey, Nengjun Yi, Hemant K. Tiwari, David B. Allison
Journal:
Human Heredity
Hum Hered (2007) 63 (2): 67–84.
Published Online: 02 February 2007
... that is recognized as the ‘best’ for detecting, characterizing, and interpreting gene × gene interactions. Instead, a combination of approaches with the aim of balancing their specific strengths may be the optimal approach to investigate gene × gene interactions in human data. Epistasis Genome-wide association...
Journal Articles
The Use of the Restricted Partition Method with Case-Control Data
Available to PurchaseSubject Area:
Genetics
Journal:
Human Heredity
Hum Hered (2007) 63 (2): 93–100.
Published Online: 02 February 2007
... Medicine, and bDivision of Biostatistics, Washington University in St. Louis School of Medicine, St. Louis, Mo., USA Key Words Epistasis Gene-gene interactions Multilocus traits Association studies Abstract Background/Aims: Many diseases important to public health are not due solely to a single...
Journal Articles
Backward Genotype-Trait Association (BGTA)-Based Dissection of Complex Traits in Case-Control Designs
Available to PurchaseSubject Area:
Genetics
Journal:
Human Heredity
Hum Hered (2006) 62 (4): 196–212.
Published Online: 14 December 2006
... or property resulting from any ideas, methods, instructions or products referred to in the content or advertisements. Multi-locus Genotype Association mapping Case-control design Complex traits Epistasis National Institutes of Health (NIH) 10.13039/100000002 Original Paper Hum Hered...
Journal Articles
Evidence for Consistent Intragenic and Intergenic Interactions between SNP Effects in the APOA1/C3/A4/A5 Gene Cluster
Available to PurchaseSubject Area:
Genetics
Sara C. Hamon, Sharon L.R. Kardia, Eric Boerwinkle, Kiang Liu, Kathy L.E. Klos, Andrew G. Clark, Charles F. Sing
Journal:
Human Heredity
Hum Hered (2006) 61 (2): 87–96.
Published Online: 15 June 2006
..., University of Texas Health Science Center, Houston, Tex.; dDepartment of Preventive Medicine, Northwestern University, Chicago, Ill.; eDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, N.Y., USA Key Words Cholesterol Interaction Epistasis APOA1/C3/A4/A5 gene cluster...
Journal Articles
Multilocus Analysis of Hypertension: A Hierarchical Approach
Available to PurchaseSubject Area:
Genetics
Scott M. Williams, Marylyn D. Ritchie, John A. Phillips III, Elliot Dawson, Melissa Prince, Elvira Dzhura, Alecia Willis, Amma Semenya, Marshall Summar, Bill C. White, Jonathan H. Addy, John Kpodonu, Lee-Jun Wong, Robin A. Felder, Pedro A. Jose, Jason H. Moore
Journal:
Human Heredity
Hum Hered (2004) 57 (1): 28–38.
Published Online: 07 May 2004
.... Epistasis Hypertension Blacks Renin-angiotensin system Original Paper Hum Hered 2004;57:28 38 DOI: 10.1159/000077387 Received: August 28, 2003 Accepted after revision: December 8, 2003 Multilocus Analysis of Hypertension: A Hierarchical Approach Scott M. Williams a, b, c, d Marylyn D. Ritchie a John...
Journal Articles
How to Model a Complex Trait: 2. Analysis with Two Disease Loci
Available to PurchaseSubject Area:
Genetics
Journal:
Human Heredity
Hum Hered (2004) 56 (4): 200–211.
Published Online: 25 March 2004
... estimates of the disease-locus positions. Linkage analysis Complex traits Locus heterogeneity Genotype-phenotype relation Two-locus models Epistasis Interaction 31 10 2002 1 07 2003 25 3 2004 © 2003 S. Karger AG, Basel 2004 Copyright / Drug Dosage / Disclaimer Copyright...
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