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Issues
July 2005
ISSN 1424-8581
EISSN 1424-859X
In this Issue
Journal Name Change
Vol. 1-11 (1962-1972) were published under the journal's former title Cytogenetics and Vol. 12-95 (1973-2001) under Cytogenetics and Cell Genetics.
Cytogenetic and Genome Research 2005, Vol. 110, No. 1-4
Special Section
Title Page / Table of Contents
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 1–6.
https://doi.org/10.1159/000087277
Paper
Preface
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 7.
https://doi.org/10.1159/000087278
Retrotransposable Elements, Retrotransposition and Genome Evolution
Echoes from the past – are we still in an RNP world?
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 8–24.
https://doi.org/10.1159/000084934
What transposable elements tell us about genome organization and evolution: the case of Drosophila
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 25–34.
https://doi.org/10.1159/000084935
LINEs, SINEs and processed pseudogenes: parasitic strategies for genome modeling
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 35–48.
https://doi.org/10.1159/000084936
Hybrid genome evolution by transposition
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 49–55.
https://doi.org/10.1159/000084937
Reverse transcription in genome evolution
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 56–62.
https://doi.org/10.1159/000084938
Genome evolution mediated by Ty elements in Saccharomyces
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 63–69.
https://doi.org/10.1159/000084939
Happy together: the life and times of Ty retrotransposons and their hosts
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 70–90.
https://doi.org/10.1159/000084940
LTR retrotransposons and flowering plant genome size: emergence of the increase/decrease model
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 91–107.
https://doi.org/10.1159/000084941
How repeated retroelements format genome function
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 108–116.
https://doi.org/10.1159/000084942
Retrotransposable Elements, Chromosomes and Chromatin
Clustering, duplication and chromosomal distribution of mouse SINE retrotransposons
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 117–123.
https://doi.org/10.1159/000084943
Heterochromatic distribution of HeT-A- and TART-like sequences in several Drosophila species
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 124–133.
https://doi.org/10.1159/000084944
Retroelements: tools for sex chromosome evolution
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 134–143.
https://doi.org/10.1159/000084945
Retrotransposable elements on the W chromosome of the silkworm, Bombyx mori
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 144–151.
https://doi.org/10.1159/000084946
HeT-A and TART, two Drosophila retrotransposons with a bona fide role in chromosome structure for more than 60 million years
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 152–159.
https://doi.org/10.1159/000084947
I element distribution in mitotic heterochromatin of Drosophila melanogaster reactive strains: identification of a specific site which is correlated with the reactivity levels
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 160–164.
https://doi.org/10.1159/000084948
Transposable elements as artisans of the heterochromatic genome in Drosophila melanogaster
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 165–172.
https://doi.org/10.1159/000084949
Fixed and unstable I-related transposable elements in heterochromatin of Drosophila melanogaster
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 173–180.
https://doi.org/10.1159/000084950
ERVK9, transposons and the evolution of MHC class I duplicons within the alpha-block of the human and chimpanzee
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 181–192.
https://doi.org/10.1159/000084951
Polymorphic Alu insertions within the Major Histocompatibility Complex class I genomic region: a brief review
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 193–202.
https://doi.org/10.1159/000084952
A comparative study of retrotransposons in the centromeric regions of A and B chromosomes of maize
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 203–208.
https://doi.org/10.1159/000084953
Retrotransposition and Its Regulation
Transcriptional interference mediated by retrotransposons within the genome of their host: lessons from alleles of the white gene from Drosophila melanogaster
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 209–214.
https://doi.org/10.1159/000084954
I elements in Drosophila: in vivo retrotransposition and regulation
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 215–222.
https://doi.org/10.1159/000084955
The structures of mouse and human L1 elements reflect their insertion mechanism
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 223–228.
https://doi.org/10.1159/000084956
Stress activation and genomic impact of Tnt1 retrotransposons in Solanaceae
Subject Area:
Genetics
M.-A. Grandbastien; C. Audeon; E. Bonnivard; J.M. Casacuberta; B. Chalhoub; A.-P.P. Costa; Q.H. Le; D. Melayah; M. Petit; C. Poncet; S.M. Tam; M.-A. van Sluys; C. Mhiri
Cytogenet Genome Res (2005) 110 (1-4): 229–241.
https://doi.org/10.1159/000084957
Host defenses to transposable elements and the evolution of genomic imprinting
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 242–249.
https://doi.org/10.1159/000084958
APE-type non-LTR retrotransposons: determinants involved in target site recognition
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 250–268.
https://doi.org/10.1159/000084959
Reverse transcriptase and integrase of the Saccharomyces cerevisiae Ty1 element
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 269–287.
https://doi.org/10.1159/000084960
Transfer RNA gene-targeted integration: an adaptation of retrotransposable elements to survive in the compact Dictyostelium discoideum genome
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 288–298.
https://doi.org/10.1159/000084961
Competition between R1 and R2 transposable elements in the 28S rRNA genes of insects
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 299–306.
https://doi.org/10.1159/000084962
Retrotransposable Elements and Gene Evolution
A family of neofunctionalized Ty3/gypsy retrotransposon genes in mammalian genomes
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 307–317.
https://doi.org/10.1159/000084963
Human endogenous retroviruses: from infectious elements to human genes
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 318–332.
https://doi.org/10.1159/000084964
Transposable elements donate lineage-specific regulatory sequences to host genomes
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 333–341.
https://doi.org/10.1159/000084965
Impact of transposable elements on the evolution of mammalian gene regulation
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 342–352.
https://doi.org/10.1159/000084966
Endogenous retroviruses and animal reproduction
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 353–364.
https://doi.org/10.1159/000084967
Human retroelements may introduce intragenic polyadenylation signals
Subject Area:
Genetics
A.M. Roy-Engel; M. El-Sawy; L. Farooq; G.L. Odom; V. Perepelitsa-Belancio; H. Bruch; O.O. Oyeniran; P.L. Deininger
Cytogenet Genome Res (2005) 110 (1-4): 365–371.
https://doi.org/10.1159/000084968
Evolution of Retrotransposable Elements
Mobile genetic elements and sexual reproduction
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 372–382.
https://doi.org/10.1159/000084969
Evolutionary forces generating sequence homogeneity and heterogeneity within retrotransposon families
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 383–391.
https://doi.org/10.1159/000084970
Ribonuclease H evolution in retrotransposable elements
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 392–401.
https://doi.org/10.1159/000084971
The recent evolution of human L1 retrotransposons
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 402–406.
https://doi.org/10.1159/000084972
Extinction of LINE-1 activity coincident with a major mammalian radiation in rodents
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 407–415.
https://doi.org/10.1159/000084973
SINE extinction preceded LINE extinction in sigmodontine rodents: implications for retrotranspositional dynamics and mechanisms
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 416–425.
https://doi.org/10.1159/000084974
Abundance, distribution and dynamics of retrotransposable elements and transposons: similarities and differences
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 426–440.
https://doi.org/10.1159/000084975
Comparative evolution history of SINEs in Arabidopsis thaliana and Brassica oleracea: evidence for a high rate of SINE loss
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 441–447.
https://doi.org/10.1159/000084976
Human endogenous retroviruses in the primate lineage and their influence on host genomes
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 448–456.
https://doi.org/10.1159/000084977
Diversity of Retrotransposable Elements
Classification and nomenclature of retrotransposable elements
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 457–461.
https://doi.org/10.1159/000084978
Repbase Update, a database of eukaryotic repetitive elements
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 462–467.
https://doi.org/10.1159/000084979
Genome-wide experimental identification and functional analysis of human specific retroelements
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 468–474.
https://doi.org/10.1159/000084980
SINEs and LINEs: symbionts of eukaryotic genomes with a common tail
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 475–490.
https://doi.org/10.1159/000084981
Retrons, msDNA, and the bacterial genome
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 491–499.
https://doi.org/10.1159/000084982
Transposable elements in mosquitoes
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 500–509.
https://doi.org/10.1159/000084983
Penelope-like elements – a new class of retroelements: distribution, function and possible evolutionary significance
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 510–521.
https://doi.org/10.1159/000084984
Diversity and clustered distribution of retrotransposable elements in the compact genome of the pufferfish Tetraodon nigroviridis
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 522–536.
https://doi.org/10.1159/000084985
The Alu Yc1 subfamily: sorting the wheat from the chaff
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 537–542.
https://doi.org/10.1159/000084986
Phylogenomic analysis of chromoviruses
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 543–552.
https://doi.org/10.1159/000084987
Abyss1: A novel L2-like non-LTR retroelement of the snakelocks anemone (Anemonia sulcata)
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 553–558.
https://doi.org/10.1159/000084988
Characterisation of pararetrovirus-like sequences in the genome of potato (Solanum tuberosum)
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 559–565.
https://doi.org/10.1159/000084989
The evolution of transposons in Schizosaccharomyces pombe
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 566–574.
https://doi.org/10.1159/000084990
Paper
DIRS-1 and the other tyrosine recombinase retrotransposons
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 575–588.
https://doi.org/10.1159/000084991
Diversity of Retrotransposable Elements
Group II intron retroelements: function and diversity
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 589–597.
https://doi.org/10.1159/000084992
Paper
A movable feast: diverse retrotransposons and their contribution to barley genome dynamics
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 598–605.
https://doi.org/10.1159/000084993
Further Section
Author Index
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 606.
https://doi.org/10.1159/000087279
Contents Vol. 110, No. 1–4, 2005
Subject Area:
Genetics
Cytogenet Genome Res (2005) 110 (1-4): 607–608.
https://doi.org/10.1159/000087280