Transposable elements have driven genome evolution and plasticity in many ways across a range of organisms. Different types of biotic and abiotic stresses can stimulate the expression or transposition of these mobile elements. Here, we cytogenetically analyzed natural fish populations of the same species living under different environmental conditions to test the influence and organization of transposable elements in their genome. Differential behavior was observed for the markers Rex 1, Rex 3, and Rex 6 in the chromosomes of individuals of the same species but coming from different environments (polluted and unpolluted). An increase in the number of Rex transposable elements in the chromosomes and their influence on the genome of populations living in a polluted environment indicates that they must be under constant adaptive evolution.

1.
Alzohairy AM, Gyulai G, Jansen RK, Bahieldin A: Transposable elements domesticated and neofunctionalized by eukaryotic genomes. Plasmid 69:1-15 (2013).
2.
Barbosa CM, Mareco EA, Silva MD, Martins C, Alves-Costa FA: Differential expression of a retrotransposable element, Rex6, in Colossoma macropomum fish from different Amazonian environments. Mob Genet Elements 4:e30003 (2014).
3.
Bertollo LA, Takahashi CS, Moreira-Filho O: Cytotaxonomic considerations on Hoplias lacerdae (Pisces, Erytrinidae). Revista Brasileira de Genética 1:103-120 (1978).
4.
Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, et al: The genomic substrate for adaptive radiation in African cichlid fish. Nature 513:375-381 (2014).
5.
Casacuberta E, Gonzalez J: The impact of transposable elements in environmental adaptation. Mol Ecol 22:1503-1517 (2013).
6.
Chalopin D, Naville M, Plard F, Galiana D, Volff JN: Comparative analysis of transposable elements highlights mobilome diversity and evolution in vertebrates. Genome Biol Evol 7:567-580 (2015).
7.
Coan RL, Martins C: Landscape of transposable elements focusing on the B chromosome of the cichlid fish Astatotilapia latifasciata. Genes 9:269 (2018).
8.
De la Veja E, Degnan BM, Hall MR, Wilson KJ: Differential expression of immune-related genes and transposable elements in black tiger shrimp (Penaeus monodon) exposed to a range of environmental stressors. Fish Shellfish Immunol 23:1072-1088 (2007).
9.
Frederico RG, Olden JD, Zuanon J: Climate change sensitivity of threatened, and largely unprotected, Amazonian fishes. Aquatic Conserv Mar Freshw Ecosyst 26:91-102 (2016).
10.
Hancks DC, Kazazian HH Jr: Active human retrotransposons: variation and disease. Curr Opin Genet Dev 22:191-203 (2012).
11.
Heinrichs-Caldas W, Campos DF, Paula-Silva MN, Almeida-Val VMF: Oxygen-dependent distinct expression of hif-1α gene in aerobic and anaerobic tissues of the Amazon Oscar, Astronotus crassipinnis. Comp Biochem Physiol B Biochem Mol Biol 227:31-38 (2019).
12.
Hoffmann AA, Sgro CM: Climate change and evolutionary adaptation. Nature 470:479-485 (2011).
13.
Hua-Van A, Le Rouzic A, Boutin TS, Filee J, Capy P: The struggle for life of the genome's selfish architects. Biol Direct 6:19 (2011).
14.
Lanciano S, Mirouze M: Transposable elements: all mobile, all different, some stress responsive, some adaptive? Curr Opin Genet Dev 49:106-114 (2018).
15.
Lee CE: Evolutionary genetics of invasive species Review. Trends Ecol Evol 17:9-11 (2002).
16.
Lisch DR: How important are transposons for plant evolution? Nat Rev Genet 14:49-61 (2013).
17.
Negi P, Rai AN, Suprasanna P: Moving through the stressed genome: emerging regulatory roles for transposons in plant stress response. Front Plant Sci 7:1448 (2016).
18.
Philippsen GS: Estudo da influência de elementos transponíveis nos genomas de algas C. reinhardtii e V. carteri. Tese de doutorado. Pós-Graduação em Física do Instituto de Física de São Carlos, Universidade de São Paulo, p 151 (2014).
19.
Pinto AGN, Horbe AMC, Silva MSR, Miranda AF, Pascoaloato D, Santos HMC: Efeitos da ação antrópica sobre a hidrogeoquímica do Rio Negro na orla de Manaus, AM. Acta Amazonica 39:627-638 (2009).
20.
Rey O, Danchin E, Mirouze M, Loot C, Blanchet S: Adaptation to global change: a transposable element-epigenetics perspective. Trends Ecol Evol 31:514-526 (2016).
21.
Santana GP, Barroncas PSR: Estudo de metais pesados (Co, Cu, Fe, Cr, Ni, Mn, Pb e Zn) na Bacia do Tarumã-Açu Manaus - (AM). Acta Amazonica 37:111-118 (2007).
22.
Santos FA, Marques DF, Terencio ML, Feldberg E, Rodrigues LRR: Cytogenetic variation of repetitive DNA elements in Hoplias malabaricus (Characiformes - Erythrinidae) from white, black and clear water rivers of the Amazon basin. Genet Mol Biol 39:40-48 (2016).
23.
Silva FA, Schneider CH, Feldberg E, Baccaro FB, Carvalho NDM, Gross MC: Genomic organization under different environmental conditions: Hoplosternum littorale as a model. Zebrafish 13:197-208 (2016).
24.
Silva FA, Feldberg F, Carvalho NDM, Rangel SMH, Schneider CH, et al: Effects of environmental pollution on the rDNAomics of Amazonian fish. Environ Pollut 252:180-187 (2019).
25.
Sotero-Caio CG, Platt RN, Suh A, Ray, DA: Evolution and diversity of transposable elements in vertebrate genomes. Genome Biol Evol 9:161-177 (2017).
26.
Stapley J, Santure AW, Dennis SR: Transposable elements as agents of rapid adaptation may explain the genetic paradox of invasive species. Mol Ecol 24:2241-2252 (2015).
27.
Suh A, Smeds L, Ellegren H: Abundant recent activity of retrovirus-like retrotransposons within and among flycatcher species implies a rich source of structural variation in songbird genomes. Mol Ecol 27:99-111 (2018).
28.
Terencio ML, Schneider CH, Gross MC, Vicari MR, Farias IP, et al: Evolutionary dynamics of repetitive DNA in Semaprochilodus (Characiformes, Prochilodontidae): a fish model for sex chromosome differentiation. Sex Dev 7:325-333 (2013).
29.
Van't Hof AE, Campagne P, Rigden DJ, Yung CJ, Lingley J, et al: The industrial melanism mutation in British peppered moths is a transposable element. Nature 534:102-105 (2016).
30.
Volff JN, Korting C, Sweeney K, Schartl M: The non-LTR retrotransposon Rex3 from the fish Xiphophorus is widespread among teleosts. Mol Biol Evol 16:1427-1438 (1999).
31.
Volff JN, Korting C, Schartl M: Multiple lineages of the non-LTR retrotransposon Rex1 with varying success in invading fish genomes. Mol Biol Evol 17: 673-1684 (2000).
32.
Volff JN, Hornung U, Schartl M: Fish retroposons related to the Penelope element of Drosophila virilis define a new group of retrotransposable elements. Mol Genet Genomics 265:711-720 (2001a).
33.
Volff JN, Körting C, Froschauer A, Sweeney K, Schartl M: Non-LTR retrotransposons encoding a restriction enzyme-like endonuclease in vertebrates. J Mol Evol 52:351-360 (2001b).
34.
Zeh DW, Zeh Já, Ishida Y: Transposable elements and an epigenetic basis for punctuated equilibria. BioEssays 31:715-726 (2009).
Copyright / Drug Dosage / Disclaimer
Copyright: All rights reserved. No part of this publication may be translated into other languages, reproduced or utilized in any form or by any means, electronic or mechanical, including photocopying, recording, microcopying, or by any information storage and retrieval system, without permission in writing from the publisher.
Drug Dosage: The authors and the publisher have exerted every effort to ensure that drug selection and dosage set forth in this text are in accord with current recommendations and practice at the time of publication. However, in view of ongoing research, changes in government regulations, and the constant flow of information relating to drug therapy and drug reactions, the reader is urged to check the package insert for each drug for any changes in indications and dosage and for added warnings and precautions. This is particularly important when the recommended agent is a new and/or infrequently employed drug.
Disclaimer: The statements, opinions and data contained in this publication are solely those of the individual authors and contributors and not of the publishers and the editor(s). The appearance of advertisements or/and product references in the publication is not a warranty, endorsement, or approval of the products or services advertised or of their effectiveness, quality or safety. The publisher and the editor(s) disclaim responsibility for any injury to persons or property resulting from any ideas, methods, instructions or products referred to in the content or advertisements.
You do not currently have access to this content.